-
Notifications
You must be signed in to change notification settings - Fork 1
Expand file tree
/
Copy pathmain.py
More file actions
163 lines (154 loc) · 7 KB
/
main.py
File metadata and controls
163 lines (154 loc) · 7 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
from pipeline_ecg import kd_student_learning_ho,student_learning_without_tea
import os
import argparse
import numpy as np
import warnings
def ECG_config(seed,root,zo_config='Hybrid'):
parser = argparse.ArgumentParser(description='')
parser.add_argument('--task', type=str, default='within')
parser.add_argument('--model_config', type=str, default='medium')
parser.add_argument('--semi_config', type=str, default='default')
parser.add_argument('--learning_rate', type=float, default=0.001)
parser.add_argument('--ranklist', type=str, default='lora_ave')
parser.add_argument('--root', type=str, default=root)
parser.add_argument('--seed', type=int, default=seed)
parser.add_argument('--pretrain_epoch', type=int, default=50)
parser.add_argument('--finetune_epoch', type=int, default=200) # 200
parser.add_argument('--num_class', type=int, default=25)
parser.add_argument('--finetune_label_ratio', type=float, default=0.10)#0.10
parser.add_argument('--pretrain_dataset', type=str, default='CODE_test')
parser.add_argument('--finetune_dataset', type=str, default='WFDB_ChapmanShaoxing')
# dataset_list = ['WFDB_Ga', 'WFDB_PTBXL', 'WFDB_Ningbo', 'WFDB_ChapmanShaoxing']
parser.add_argument('--r', type=int, default=16)
parser.add_argument('--batch_size', type=int, default=128)
parser.add_argument('--device', type=str, default='cuda:3')
parser.add_argument('--interval', type=int, default=50)
## zero-order optimization parameter
parser.add_argument('--zo_config', type=str, default=zo_config)
parser.add_argument('--q', type=int, default=1)
parser.add_argument('--bp_batch', type=int, default=4)
parser.add_argument('--zo_eps', type=float, default=1e-3)
parser.add_argument('--trainer', type=str, default='zo') # zo_sign_opt
parser.add_argument('--gradient_accumulation_steps', type=int, default=1)
parser.add_argument('--gradient_sparsity', type=float, default=None)
parser.add_argument('--perturbation_mode', type=str, default='two_side')
parser.add_argument('--weight_decay', type=float, default=1e-2)
parser.add_argument('--tune_bp', type=bool, default=False)
## hyper-parameter for hybrid_tuning
parser.add_argument('--coef', type=float, default=0.85)
parser.add_argument('--no_grad_correct', type=bool, default=False)
## hyper-parameter for know distillation
parser.add_argument('--enable_distillation', type=bool, default=True)
parser.add_argument('--student_load_pretrain', type=bool, default=True)
parser.add_argument('--leads_for_teacher', type=int, default=12)
parser.add_argument('--leads_for_student', type=int, default=12)
args = parser.parse_args()
return args
def exp_main_kd_ho(args):
args.bp_batch = 2
dataset_list = ['WFDB_Ga', 'WFDB_PTBXL', 'WFDB_Ningbo', 'WFDB_ChapmanShaoxing']
num_class_list = [18, 19, 23, 16]
method = 'lora_ave'
print('current method:', method)
args.ranklist = method
## Determine Trainer Config
if args.zo_config == 'purebp' or args.zo_config == 'purebp_noencoder':
args.tune_bp = True
save_file_name = 'LoRA_results.npy'
else:
print('FineTune !!')
args.ranklist = 'FT'
save_file_name = 'Full_FT_results.npy'
if args.leads_for_student < 12:
save_file_name = ('TeaLead' + str(args.leads_for_teacher) + '_' + 'StuLead'
+ str(args.leads_for_student) + '_' + save_file_name)
print(save_file_name)
## Running our Experiments
print('current seed', args.seed)
result_dataset = []
for i in range(4):
args.finetune_dataset = dataset_list[i]
args.num_class = num_class_list[i]
print(args.finetune_dataset)
print('labeled_ratio:', args.finetune_label_ratio)
if args.enable_distillation:
result_dataset.append(kd_student_learning_ho(args=args))
else:
result_dataset.append(student_learning_without_tea(args=args))
os.chdir(args.root + '/result')
np.save(save_file_name, result_dataset)
def exp_main_kd_ho_gridsearch(args):
args.bp_batch = 2
dataset_list = ['WFDB_Ga', 'WFDB_PTBXL', 'WFDB_Ningbo', 'WFDB_ChapmanShaoxing']
num_class_list = [18, 19, 23, 16]
method = 'lora_ave'
print('current method:', method)
args.ranklist = method
save_file_name = 'Gridsearch_Results.npy'
if args.leads_for_student < 12:
save_file_name = ('TeaLead' + str(args.leads_for_teacher) + '_' + 'StuLead'
+ str(args.leads_for_student) + '_' + save_file_name)
print(save_file_name)
break_flag = False
zo_eps_list = [1e-3,1e-4]
print(zo_eps_list)
coef_list = [0.85, 0.9, 0.95, 0.99]
print(coef_list)
os.chdir(args.root + '/result')
if os.path.exists(save_file_name):
result = np.load(save_file_name, allow_pickle=True).tolist()
print('file exist')
else:
result = []
flag = -1
print('break flag', break_flag)
for para in zo_eps_list:
for coef in coef_list:
flag = flag + 1
if flag < len(result):
continue
args.coef = coef
args.zo_eps = para
print('current bp batch', args.bp_batch)
print('current coef', args.coef)
print('current zo eps', args.zo_eps)
print('current seed', args.seed)
result_dataset = []
for i in range(4):
args.ranklist = method
args.finetune_dataset = dataset_list[i]
args.num_class = num_class_list[i]
print(args.finetune_dataset)
print('labeled_ratio:', args.finetune_label_ratio)
print('learning_rate:', args.learning_rate)
result_dataset.append(kd_student_learning_ho(args=args))
result.append(result_dataset)
print('running progress', len(result))
os.chdir(args.root + '/result')
np.save(save_file_name, result)
if break_flag:
break
if break_flag:
break
def Task_ECG_KD(seed, root, zo_config='H_Tuning'):
args = ECG_config(seed, root, zo_config)
print('seed:', args.seed)
print('device:', args.device)
args.finetune_dataset = args.finetune_dataset
args.model_config = 'medium'
print('model_config:', args.model_config)
args.r = 16
args.semi_config = 'nosemi'
if zo_config=='H_Tuning':
exp_main_kd_ho_gridsearch(args)
else:
exp_main_kd_ho(args)
if __name__ == '__main__':
warnings.filterwarnings("ignore", message="invalid value encountered in divide")
warnings.filterwarnings("ignore", message="divide by zero encountered in divide")
warnings.filterwarnings("ignore", category=FutureWarning)
Task = 'ECG'
root = os.getcwd()
#Task_ECG_KD(18, root, 'FT')
#Task_ECG_KD(18, root, 'purebp')
Task_ECG_KD(18, root, 'H_Tuning')