rename DBGI to EMI, and remove its custom page

vemonet · vemonet · commit 42e8a9f65557 · 2025-08-06T10:47:19.000+02:00
diff --git a/.github/workflows/deploy.yml b/.github/workflows/deploy.yml
@@ -1,4 +1,4 @@
-name: Deploy demo to GitHub Pages
+name: Deploy to GitHub Pages
 on:
   push:
     branches: ["main"]
diff --git a/packages/demo/src/check.html b/packages/demo/src/check.html
@@ -14,7 +14,6 @@
   </head>
 
   <!-- https://sparql.uniprot.org/sparql/ -->
-  <!-- https://biosoda.unil.ch/graphdb/repositories/emi-dbgi -->
   <!-- https://rdf.metanetx.org/sparql/ -->
   <!-- CORS error: https://beta.metanetx.org/sparql/ -->
 
diff --git a/packages/demo/src/emi.html b/packages/demo/src/emi.html
diff --git a/packages/demo/src/index.html b/packages/demo/src/index.html
@@ -81,7 +81,6 @@ <h3>ℹ️ About</h3>
           >
         </li>
         <li><a href="hamap">HAMAP - High-quality Automated and Manual Annotation of Proteins</a></li>
-        <li><a href="dbgi">DBGI - The Digital Botanical Garden Initiative</a></li>
       </ul>
     </div>
   </body>
diff --git a/packages/demo/vite.config.ts b/packages/demo/vite.config.ts
@@ -1,4 +1,3 @@
-/// <reference types="vitest/config" />
 import {defineConfig} from "vite";
 import {resolve} from "path";
 
@@ -23,7 +22,6 @@ export default defineConfig({
         rhea: resolve(__dirname, "src/rhea.html"),
         swisslipids: resolve(__dirname, "src/swisslipids.html"),
         hamap: resolve(__dirname, "src/hamap.html"),
-        emi: resolve(__dirname, "src/emi.html"),
       },
     },
   },
diff --git a/packages/sparql-editor/index.html b/packages/sparql-editor/index.html
@@ -24,7 +24,7 @@
   <body>
     <div>
       <sparql-editor
-        endpoint="https://sparql.uniprot.org/sparql/,https://www.bgee.org/sparql/,https://sparql.omabrowser.org/sparql/,https://beta.sparql.swisslipids.org/,https://sparql.rhea-db.org/sparql/,https://biosoda.unil.ch/graphdb/repositories/emi-dbgi,https://hamap.expasy.org/sparql/,https://rdf.metanetx.org/sparql/,https://idsm.elixir-czech.cz/sparql/endpoint/idsm"
+        endpoint="https://sparql.uniprot.org/sparql/,https://www.bgee.org/sparql/,https://sparql.omabrowser.org/sparql/,https://beta.sparql.swisslipids.org/,https://sparql.rhea-db.org/sparql/,https://biosoda.unil.ch/emi/sparql/,https://hamap.expasy.org/sparql/,https://rdf.metanetx.org/sparql/,https://idsm.elixir-czech.cz/sparql/endpoint/idsm"
         examples-repo-add-url="https://github.com/sib-swiss/sparql-examples/new/master/examples/UniProt"
         add-limit="1000"
         style="--btn-bg-color: #ffe8e5"
diff --git a/packages/sparql-overview/index.html b/packages/sparql-overview/index.html
@@ -19,7 +19,7 @@
       <!-- <sparql-overview endpoint="https://sparql.rhea-db.org/sparql/"></sparql-overview> -->
       <!-- <sparql-overview endpoint="https://beta.sparql.swisslipids.org/"></sparql-overview> -->
 
-      <!-- endpoints="https://sparql.uniprot.org/sparql/,https://www.bgee.org/sparql/,https://sparql.omabrowser.org/sparql/,https://beta.sparql.swisslipids.org/,https://sparql.rhea-db.org/sparql/,https://biosoda.unil.ch/graphdb/repositories/emi-dbgi,https://hamap.expasy.org/sparql/,https://rdf.metanetx.org/sparql/" -->
+      <!-- endpoints="https://sparql.uniprot.org/sparql/,https://www.bgee.org/sparql/,https://sparql.omabrowser.org/sparql/,https://beta.sparql.swisslipids.org/,https://sparql.rhea-db.org/sparql/,https://biosoda.unil.ch/emi/sparql/,https://hamap.expasy.org/sparql/,https://rdf.metanetx.org/sparql/" -->
     </div>
   </body>
 

Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,4 @@`
`1`		`-name: Deploy demo to GitHub Pages`
	`1`	`+name: Deploy to GitHub Pages`
`2`	`2`	`on:`
`3`	`3`	`push:`
`4`	`4`	`branches: ["main"]`
Original file line number	Diff line number	Diff line change
`@@ -81,7 +81,6 @@ <h3>ℹ️ About</h3>`
`81`	`81`	`>`
`82`	`82`	`</li>`
`83`	`83`	`<li><a href="hamap">HAMAP - High-quality Automated and Manual Annotation of Proteins</a></li>`
`84`		`- <li><a href="dbgi">DBGI - The Digital Botanical Garden Initiative</a></li>`
`85`	`84`	`</ul>`
`86`	`85`	`</div>`
`87`	`86`	`</body>`