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Fix single target counts being incorrect#212

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AroneyS merged 6 commits intomasterfrom
fix-single-bug
Mar 3, 2026
Merged

Fix single target counts being incorrect#212
AroneyS merged 6 commits intomasterfrom
fix-single-bug

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@AroneyS AroneyS commented Feb 25, 2026

Single-sample target counts included targets that were <=10X coverage in the specific sample, as long as the target had >10X summed coverage when paired when at least one other sample.
This greatly inflates the predicted target recovery.

@AroneyS AroneyS changed the title Fix single targets being off Fix single target counts being off Feb 25, 2026
@AroneyS AroneyS changed the title Fix single target counts being off Fix single target counts being incorrect Feb 26, 2026
@AroneyS AroneyS merged commit 8d1a646 into master Mar 3, 2026
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@AroneyS AroneyS deleted the fix-single-bug branch March 3, 2026 01:08
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