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Glad to start the BioInfo journey๐Ÿงซ๐Ÿ’ป
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Glad to start the BioInfo journey๐Ÿงซ๐Ÿ’ป

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FYCodeLab/README.md

๐Ÿš€ Welcome to FYCodeLab!

A place for beginner-friendly and biologist-friendly programming and data science courses.
For learning how to code, ๐Ÿ“‚ Coding-Intro is for you. More courses are on the way! If youโ€™re a teacher take a look at our ๐Ÿ“‚ Classroom Activities


๐Ÿ“‚ Coding Courses

๐Ÿ“˜ Coding-Intro : A beginner-friendly programming course covering the basics of R and Python.

Intro to R

  • Chapter 1 - The Basics
    ๐Ÿ“– Learn the fundamentals of R programming, including syntax, data structures, and basic operations.
    ๐Ÿ”— Open the course in Google Colab: French Flagย Open in collabย ย ย ย  UK Flagย Open in collab

  • Chapter 2 - What are libraries ?
    ๐Ÿ“– Learn how to use libraries and why they are so important and useful in programming.
    ๐Ÿ”— Open the course in Google Colab: French Flagย Open in collabย ย ย ย  UK Flagย Open in collab


Intro to Python\

  • Chapter 1 - Basic functions
    ๐Ÿ“– Learn the basic operations and functions.
    ๐Ÿ”— Open the course in Google Colab: French Flagย Open in collabย ย ย ย UK Flagย Open in collab

  • Chapter 2 - A simple guide to libraries
    ๐Ÿ“– Learn how to use simple libraries and why libraries are so important and useful in programming.
    ๐Ÿ”— Open the course in Google Colab: French Flagย Open in collabย ย ย UK Flagย Open in collab


๐Ÿ“‚ ClassRoom Activities

๐Ÿ’ก Code and tools designed for interactive classroom sessions, to explore key concepts in
programming, statistics, artificial intelligence, and biology.


๐Ÿ”ฌ Malassez Grid Counting Game โ€” Hands-on Cell Counting for Biotech Students

๐Ÿงซ An interactive web-based mini-game to practice manual cell counting on a Malassez grid. Designed for students in biotechnology, bioengineering, and related life sciences, this tool simulates cell dispersion under a microscope and helps learners estimate cell concentration (cells/mL) by comparing their guess to real results.

๐ŸŽฎ Try it now in your browser (no install): ๐Ÿ‘‰ Open the Game


๐Ÿฌ SweetSpot โ€” The Power of Aggregated Data

๐Ÿ“ฆ A playful experiment using a jar of sweets to demonstrate how data science, visualization, and statistics can reveal the surprising power of group estimation. Also, learn how to make graphs with the ggplot package in R!

๐Ÿ”— Open the interactive notebook in Google Colab:ย ๐Ÿ‡ซ๐Ÿ‡ท Frenchย Open in Colabย ukย Open in Colab


๐Ÿงฌ Intro to Biopython โ€” Hands-on Genomics for Beginners

๐Ÿ“ฆ A beginner-friendly introduction to Biopython, showing how to access NCBI databases, download real genomic data (the woolly mammothโ€™s mitochondrial genome!), and visualize gene annotations using Python tools. Great for students in bioinformatics and biotechnology.

๐Ÿ”— Open the interactive notebook in Google Colab:ย ๐Ÿ‡ฌ๐Ÿ‡ง Englishย Open in Colab


๐ŸŽฏ Future Courses and Tools (Coming Soon)

โœ” Useful libraries for the beginner โœ” Machine Learning Basics
โœ” Data Science Fundamentals
โœ” etc...

We are actively working on new content to expand your programming skills!

๐Ÿ’ก Follow the repository to get notified of updates and new courses.


๐Ÿ“ฌ Stay Connected

Have questions or suggestions? Feel free to open an issue or reach out! ๐Ÿš€

Popular repositories Loading

  1. SweetSpot SweetSpot Public

    [Code: R] Classroom exercise : let students guess the number of sweets in a jar. Calculates mean median and removes outliers. Gives graph on RStudio to show students.

    Jupyter Notebook 1

  2. intro-biopython intro-biopython Public

    Easy Biopython intro

    Jupyter Notebook 1

  3. robotique-edu robotique-edu Public

    1

  4. coding-intro coding-intro Public

    Coding intro courses, designed for beginners who are just not that into computing.

    Jupyter Notebook

  5. FYCodeLab FYCodeLab Public

    for readme

  6. FYCodeLab.github.io FYCodeLab.github.io Public

    Github Pages