pull

README.md

@@ -248,8 +248,6 @@ This list includes a complete list of all sources ever used in the data set, sin
   - Italy:
     - Civil Protection Department: https://github.com/pcm-dpc/COVID-19/tree/master/
     - Ministry of Health: http://www.salute.gov.it/nuovocoronavirus
-  - Jamaica: 
-    - Ministry of Health & Wellness: https://www.moh.gov.jm
   - Japan: 
     - NHK: https://www3.nhk.or.jp/news/special/coronavirus/data/
   - Jordan:

csse_covid_19_data/README.md

@@ -274,6 +274,8 @@ Date: Location | Change | Files affected | Reason/Other notes | Source
 * January 3, 2022 | California, US | Adjust California's data based on historic probable case data provided by CDPH | [Data Source](https://covid19.ca.gov/data-and-tools/)
 * January 6, 2022 | Ohio, US | To match Ohio’s new reporting standards, the Ohio death time series is being overwritten with date of death data, and the entire time series will be updated with each time Ohio updates their death data. This is expected to occur approximately once per week. | [Data Source](https://coronavirus.ohio.gov/static/dashboards/COVIDDeathData_CountyOfResidence.csv)
 * January 6, 2022 | California, US | Adjust California's data based on historic probable case data provided by CDPH | [Data Source](https://covid19.ca.gov/data-and-tools/)
+* January 13, 2022 | Ohio, US | To match Ohio’s new reporting standards, the Ohio death time series is being overwritten with date of death data, and the entire time series will be updated with each time Ohio updates their death data. This is expected to occur approximately once per week. | [Data Source](https://coronavirus.ohio.gov/static/dashboards/COVIDDeathData_CountyOfResidence.csv)
+* January 13, 2022 | California, US | Adjust California's data based on historic probable case data provided by CDPH | [Data Source](https://covid19.ca.gov/data-and-tools/)
 
 ## Retrospective reporting of (probable) cases and deaths
 This section reports instances where large numbers of historical cases or deaths have been reported on a single day. These reports cause anomalous spikes in our time series curves. When available, we liaise with the appropriate health department and distribute the cases or deaths back over the time series. If these are successful, they will be reported in the below section titled "Large Scale Back Distributions". A large proportion of these spikes are due to the release of probable cases or deaths.

csse_covid_19_data/UID_ISO_FIPS_LookUp_Table.csv

@@ -1,6 +1,7 @@
 UID,iso2,iso3,code3,FIPS,Admin2,Province_State,Country_Region,Lat,Long_,Combined_Key,Population
 4,AF,AFG,4,,,,Afghanistan,33.93911,67.709953,Afghanistan,38928341
 8,AL,ALB,8,,,,Albania,41.1533,20.1683,Albania,2877800
+10,AQ,ATA,10,,,,Antarctica,-71.9499,23.347,Antarctica,
 12,DZ,DZA,12,,,,Algeria,28.0339,1.6596,Algeria,43851043
 20,AD,AND,20,,,,Andorra,42.5063,1.5218,Andorra,77265
 24,AO,AGO,24,,,,Angola,-11.2027,17.8739,Angola,32866268

csse_covid_19_data/csse_covid_19_daily_reports/01-01-2021.csv

@@ -838,64 +838,64 @@ FIPS,Admin2,Province_State,Country_Region,Last_Update,Lat,Long_,Confirmed,Deaths
 5145,White,Arkansas,US,2021-01-02 05:22:33,35.25688493,-91.74908296,4893,69,0,4824,"White, Arkansas, US",6213.096643937374,1.4101778050275904
 5147,Woodruff,Arkansas,US,2021-01-02 05:22:33,35.18902527,-91.2439489,367,2,0,365,"Woodruff, Arkansas, US",5806.962025316456,0.5449591280653951
 5149,Yell,Arkansas,US,2021-01-02 05:22:33,35.00292371,-93.41171338,2423,43,0,2380,"Yell, Arkansas, US",11353.732252471767,1.7746595130004128
-6001,Alameda,California,US,2021-01-02 05:22:33,37.64629437,-121.8929271,54668,579,0,54090,"Alameda, California, US",3270.9897333200106,1.059101135927125
+6001,Alameda,California,US,2021-01-02 05:22:33,37.64629437,-121.8929271,54660,579,0,54090,"Alameda, California, US",3270.9897333200106,1.059101135927125
 6003,Alpine,California,US,2021-01-02 05:22:33,38.59678594,-119.8223594,67,0,0,67,"Alpine, California, US",5934.455270150575,0.0
 6005,Amador,California,US,2021-01-02 05:22:33,38.44583082,-120.65696,2534,24,0,2510,"Amador, California, US",6374.522036627088,0.9471191791633781
-6007,Butte,California,US,2021-01-02 05:22:33,39.66727762,-121.6005252,8616,105,0,8514,"Butte, California, US",3932.276696504339,1.2182387747998609
+6007,Butte,California,US,2021-01-02 05:22:33,39.66727762,-121.6005252,8607,105,0,8514,"Butte, California, US",3932.276696504339,1.2182387747998609
 6009,Calaveras,California,US,2021-01-02 05:22:33,38.20537103,-120.552913,1189,21,0,1168,"Calaveras, California, US",2590.131793922231,1.7661900756938604
 6011,Colusa,California,US,2021-01-02 05:22:33,39.17881957,-122.2331726,1417,7,0,1410,"Colusa, California, US",6576.321529679306,0.4940014114326041
-6013,Contra Costa,California,US,2021-01-02 05:22:33,37.91923498,-121.9289527,42102,351,0,41752,"Contra Costa, California, US",3649.939403186404,0.8336698097522742
+6013,Contra Costa,California,US,2021-01-02 05:22:33,37.91923498,-121.9289527,42091,351,0,41752,"Contra Costa, California, US",3649.939403186404,0.8336698097522742
 6015,Del Norte,California,US,2021-01-02 05:22:33,41.74228275,-123.8974063,760,2,0,756,"Del Norte, California, US",2725.4422551416656,0.2638522427440633
-6017,El Dorado,California,US,2021-01-02 05:22:33,38.77965956,-120.5233166,6202,27,0,6175,"El Dorado, California, US",3216.087698283059,0.43534343760077393
-6019,Fresno,California,US,2021-01-02 05:22:33,36.75733899,-119.6466953,72796,717,0,72091,"Fresno, California, US",7287.351328844631,0.9847818920997693
-6021,Glenn,California,US,2021-01-02 05:22:33,39.59875897,-122.3938452,1827,9,0,1818,"Glenn, California, US",6434.684605360476,0.49261083743842365
+6017,El Dorado,California,US,2021-01-02 05:22:33,38.77965956,-120.5233166,6193,27,0,6175,"El Dorado, California, US",3216.087698283059,0.43534343760077393
+6019,Fresno,California,US,2021-01-02 05:22:33,36.75733899,-119.6466953,72763,717,0,72091,"Fresno, California, US",7287.351328844631,0.9847818920997693
+6021,Glenn,California,US,2021-01-02 05:22:33,39.59875897,-122.3938452,1826,9,0,1818,"Glenn, California, US",6434.684605360476,0.49261083743842365
 6023,Humboldt,California,US,2021-01-02 05:22:33,40.69923009,-123.876044,1789,21,0,1768,"Humboldt, California, US",1319.730299945411,1.1738401341531581
-6025,Imperial,California,US,2021-01-02 05:22:33,33.0393082,-115.3669042,24380,418,0,23967,"Imperial, California, US",13456.391579063544,1.714168546237441
+6025,Imperial,California,US,2021-01-02 05:22:33,33.0393082,-115.3669042,24368,418,0,23967,"Imperial, California, US",13456.391579063544,1.714168546237441
 6027,Inyo,California,US,2021-01-02 05:22:33,36.51112084,-117.41119779999998,607,20,0,587,"Inyo, California, US",3364.9315372249016,3.2948929159802307
 6029,Kern,California,US,2021-01-02 05:22:33,35.34329425,-118.7277796,69484,512,0,68972,"Kern, California, US",7718.7120224127475,0.736860284382016
-6031,Kings,California,US,2021-01-02 05:22:33,36.07409056,-119.8159973,16978,108,0,16871,"Kings, California, US",11101.739244148032,0.6360798633606219
+6031,Kings,California,US,2021-01-02 05:22:33,36.07409056,-119.8159973,16971,108,0,16871,"Kings, California, US",11101.739244148032,0.6360798633606219
 6033,Lake,California,US,2021-01-02 05:22:33,39.10124298,-122.7536244,1888,24,0,1864,"Lake, California, US",2932.3144783027365,1.271186440677966
 6035,Lassen,California,US,2021-01-02 05:22:33,40.67311306,-120.59350990000002,4691,10,0,4681,"Lassen, California, US",15343.603833447813,0.2131741632914091
 6037,Los Angeles,California,US,2021-01-02 05:22:33,34.30828379,-118.2282411,790582,10552,0,780030,"Los Angeles, California, US",7875.023146979109,1.3347129077059685
-6039,Madera,California,US,2021-01-02 05:22:33,37.21513971,-119.76655890000002,11261,66,0,11194,"Madera, California, US",7157.067763320981,0.5861456483126111
-6041,Marin,California,US,2021-01-02 05:22:33,38.07122463,-122.7210631,9915,148,0,9768,"Marin, California, US",3831.145248158995,1.492537313432836
+6039,Madera,California,US,2021-01-02 05:22:33,37.21513971,-119.76655890000002,11255,66,0,11194,"Madera, California, US",7157.067763320981,0.5861456483126111
+6041,Marin,California,US,2021-01-02 05:22:33,38.07122463,-122.7210631,9916,148,0,9768,"Marin, California, US",3831.145248158995,1.492537313432836
 6043,Mariposa,California,US,2021-01-02 05:22:33,37.57978556,-119.9073334,255,4,0,251,"Mariposa, California, US",1482.2995989071674,1.5686274509803921
 6045,Mendocino,California,US,2021-01-02 05:22:33,39.4381191,-123.3911313,2429,24,0,2405,"Mendocino, California, US",2800.03227702913,0.9880609304240429
-6047,Merced,California,US,2021-01-02 05:22:33,37.18922369,-120.7209035,19513,229,0,19283,"Merced, California, US",7026.793431287813,1.1736367363673637
+6047,Merced,California,US,2021-01-02 05:22:33,37.18922369,-120.7209035,19511,229,0,19283,"Merced, California, US",7026.793431287813,1.1736367363673637
 6049,Modoc,California,US,2021-01-02 05:22:33,41.58965602,-120.7244817,318,0,0,318,"Modoc, California, US",3596.8781812012217,0.0
 6051,Mono,California,US,2021-01-02 05:22:33,37.93899289,-118.8872409,894,3,0,890,"Mono, California, US",6182.497923013016,0.335946248600224
-6053,Monterey,California,US,2021-01-02 05:22:33,36.21862405,-121.2413397,29259,191,0,29068,"Monterey, California, US",6740.757635447552,0.6527905943470386
+6053,Monterey,California,US,2021-01-02 05:22:33,36.21862405,-121.2413397,29256,191,0,29068,"Monterey, California, US",6740.757635447552,0.6527905943470386
 6055,Napa,California,US,2021-01-02 05:22:33,38.50735751,-122.332839,5923,28,0,5896,"Napa, California, US",4300.731792310373,0.4726536124240378
-6057,Nevada,California,US,2021-01-02 05:22:33,39.30394768,-120.7627281,2760,15,0,2745,"Nevada, California, US",2766.778607588592,0.5434782608695652
+6057,Nevada,California,US,2021-01-02 05:22:33,39.30394768,-120.7627281,2759,15,0,2745,"Nevada, California, US",2766.778607588592,0.5434782608695652
 6059,Orange,California,US,2021-01-02 05:22:33,33.70147516,-117.76459979999998,183865,1875,0,181990,"Orange, California, US",5789.761727522694,1.0197699399015583
-6061,Placer,California,US,2021-01-02 05:22:33,39.06167234,-120.7240569,14655,133,0,14522,"Placer, California, US",3679.119521802329,0.9075400887069259
+6061,Placer,California,US,2021-01-02 05:22:33,39.06167234,-120.7240569,14649,133,0,14522,"Placer, California, US",3679.119521802329,0.9075400887069259
 6063,Plumas,California,US,2021-01-02 05:22:33,40.00355989,-120.8395236,422,1,0,421,"Plumas, California, US",2243.8453767214337,0.23696682464454977
-6065,Riverside,California,US,2021-01-02 05:22:33,33.74314981,-115.9933578,198414,1990,0,196451,"Riverside, California, US",8032.273027905572,1.002816958189084
-6067,Sacramento,California,US,2021-01-02 05:22:33,38.45106826,-121.3425374,67653,848,0,66810,"Sacramento, California, US",4359.244306591635,1.2533624996304946
+6065,Riverside,California,US,2021-01-02 05:22:33,33.74314981,-115.9933578,198266,1990,0,196451,"Riverside, California, US",8032.273027905572,1.002816958189084
+6067,Sacramento,California,US,2021-01-02 05:22:33,38.45106826,-121.3425374,67649,848,0,66810,"Sacramento, California, US",4359.244306591635,1.2533624996304946
 6069,San Benito,California,US,2021-01-02 05:22:33,36.60308176,-121.069975,3808,28,0,3780,"San Benito, California, US",6062.921920774424,0.7352941176470589
-6071,San Bernardino,California,US,2021-01-02 05:22:33,34.84060306,-116.1774685,209899,1590,0,208342,"San Bernardino, California, US",9629.532793446127,0.7573881066250023
+6071,San Bernardino,California,US,2021-01-02 05:22:33,34.84060306,-116.1774685,209771,1590,0,208342,"San Bernardino, California, US",9629.532793446127,0.7573881066250023
 6073,San Diego,California,US,2021-01-02 05:22:33,33.03484597,-116.7365326,168145,1592,0,166553,"San Diego, California, US",5036.799837044271,0.946801867435844
-6075,San Francisco,California,US,2021-01-02 05:22:33,37.75215114,-122.4385672,24405,187,0,24219,"San Francisco, California, US",2768.5358386204284,0.7662050315496189
-6077,San Joaquin,California,US,2021-01-02 05:22:33,37.93433732,-121.2730061,48501,657,0,47849,"San Joaquin, California, US",6364.380671470633,1.35447161175937
-6079,San Luis Obispo,California,US,2021-01-02 05:22:33,35.38822029,-120.4039028,11445,94,0,11352,"San Luis Obispo, California, US",4042.9372225028346,0.8212475974139437
-6081,San Mateo,California,US,2021-01-02 05:22:33,37.4228808,-122.32755459999998,25176,194,0,24983,"San Mateo, California, US",3284.3577845815075,0.7705445446240616
-6083,Santa Barbara,California,US,2021-01-02 05:22:33,34.65329488,-120.0188492,18345,164,0,18182,"Santa Barbara, California, US",4108.855786911057,0.8939278316799303
-6085,Santa Clara,California,US,2021-01-02 05:22:33,37.23104908,-121.6970462,72222,680,0,71544,"Santa Clara, California, US",3746.3456738380332,0.9415152857775808
-6087,Santa Cruz,California,US,2021-01-02 05:22:33,37.05580291,-122.0066524,9563,84,0,9481,"Santa Cruz, California, US",3500.931507651539,0.8782017773131208
-6089,Shasta,California,US,2021-01-02 05:22:33,40.76391419,-122.0396884,8888,72,0,8817,"Shasta, California, US",4936.1394935584185,0.809989875126561
+6075,San Francisco,California,US,2021-01-02 05:22:33,37.75215114,-122.4385672,24399,187,0,24219,"San Francisco, California, US",2768.5358386204284,0.7662050315496189
+6077,San Joaquin,California,US,2021-01-02 05:22:33,37.93433732,-121.2730061,48484,657,0,47849,"San Joaquin, California, US",6364.380671470633,1.35447161175937
+6079,San Luis Obispo,California,US,2021-01-02 05:22:33,35.38822029,-120.4039028,11443,94,0,11352,"San Luis Obispo, California, US",4042.9372225028346,0.8212475974139437
+6081,San Mateo,California,US,2021-01-02 05:22:33,37.4228808,-122.32755459999998,25174,194,0,24983,"San Mateo, California, US",3284.3577845815075,0.7705445446240616
+6083,Santa Barbara,California,US,2021-01-02 05:22:33,34.65329488,-120.0188492,18343,164,0,18182,"Santa Barbara, California, US",4108.855786911057,0.8939278316799303
+6085,Santa Clara,California,US,2021-01-02 05:22:33,37.23104908,-121.6970462,72219,680,0,71544,"Santa Clara, California, US",3746.3456738380332,0.9415152857775808
+6087,Santa Cruz,California,US,2021-01-02 05:22:33,37.05580291,-122.0066524,9559,84,0,9481,"Santa Cruz, California, US",3500.931507651539,0.8782017773131208
+6089,Shasta,California,US,2021-01-02 05:22:33,40.76391419,-122.0396884,8892,72,0,8817,"Shasta, California, US",4936.1394935584185,0.809989875126561
 6091,Sierra,California,US,2021-01-02 05:22:33,39.57713498,-120.52007009999998,34,0,0,34,"Sierra, California, US",1131.4475873544093,0.0
-6093,Siskiyou,California,US,2021-01-02 05:22:33,41.59198861,-122.5407434,1078,3,0,1077,"Siskiyou, California, US",2480.534693033832,0.2777777777777778
-6095,Solano,California,US,2021-01-02 05:22:33,38.26827353,-121.9357113,19593,97,0,19496,"Solano, California, US",4376.925362398161,0.4950747716021028
+6093,Siskiyou,California,US,2021-01-02 05:22:33,41.59198861,-122.5407434,1077,3,0,1077,"Siskiyou, California, US",2480.534693033832,0.2777777777777778
+6095,Solano,California,US,2021-01-02 05:22:33,38.26827353,-121.9357113,19589,97,0,19496,"Solano, California, US",4376.925362398161,0.4950747716021028
 6097,Sonoma,California,US,2021-01-02 05:22:33,38.52746429,-122.8862506,19629,189,0,19440,"Sonoma, California, US",3970.7810072501293,0.9628610729023384
-6099,Stanislaus,California,US,2021-01-02 05:22:33,37.55862499,-120.9970722,38590,553,0,38039,"Stanislaus, California, US",7008.3172919769,1.4329394693200663
+6099,Stanislaus,California,US,2021-01-02 05:22:33,37.55862499,-120.9970722,38555,553,0,38039,"Stanislaus, California, US",7008.3172919769,1.4329394693200663
 6101,Sutter,California,US,2021-01-02 05:22:33,39.03417539,-121.6945899,6603,52,0,6551,"Sutter, California, US",6809.252250672882,0.7875208238679389
-6103,Tehama,California,US,2021-01-02 05:22:33,40.12570935,-122.2370171,3415,9,0,3407,"Tehama, California, US",5248.601806895704,0.26346604215456676
-6105,Trinity,California,US,2021-01-02 05:22:33,40.64917670000001,-123.114713,287,2,0,285,"Trinity, California, US",2336.1823361823363,0.6968641114982579
-6107,Tulare,California,US,2021-01-02 05:22:33,36.22026558,-118.8020203,38325,454,0,37878,"Tulare, California, US",8222.310406589517,1.18438902222686
+6103,Tehama,California,US,2021-01-02 05:22:33,40.12570935,-122.2370171,3414,9,0,3407,"Tehama, California, US",5248.601806895704,0.26346604215456676
+6105,Trinity,California,US,2021-01-02 05:22:33,40.64917670000001,-123.114713,290,2,0,285,"Trinity, California, US",2336.1823361823363,0.6968641114982579
+6107,Tulare,California,US,2021-01-02 05:22:33,36.22026558,-118.8020203,38291,454,0,37878,"Tulare, California, US",8222.310406589517,1.18438902222686
 6109,Tuolumne,California,US,2021-01-02 05:22:33,38.02644018,-119.9525093,2923,13,0,2910,"Tuolumne, California, US",5365.468629538529,0.4447485460143688
 90006,Unassigned,California,US,2021-01-02 05:22:33,,,0,0,0,0,"Unassigned, California, US",,
-6111,Ventura,California,US,2021-01-02 05:22:33,34.44465746,-119.0910613,43869,253,0,43621,"Ventura, California, US",5186.015229206412,0.576651319688198
-6113,Yolo,California,US,2021-01-02 05:22:33,38.68278902,-121.9018288,8538,120,0,8419,"Yolo, California, US",3872.562358276644,1.4053167818245695
+6111,Ventura,California,US,2021-01-02 05:22:33,34.44465746,-119.0910613,43837,253,0,43621,"Ventura, California, US",5186.015229206412,0.576651319688198
+6113,Yolo,California,US,2021-01-02 05:22:33,38.68278902,-121.9018288,8537,120,0,8419,"Yolo, California, US",3872.562358276644,1.4053167818245695
 6115,Yuba,California,US,2021-01-02 05:22:33,39.26255932,-121.3535644,3886,19,0,3867,"Yuba, California, US",4939.746783952814,0.4889346371590324
 8001,Adams,Colorado,US,2021-01-02 05:22:33,39.87432092,-104.3362578,40304,521,0,39783,"Adams, Colorado, US",7789.4016671144,1.2926756649464073
 8003,Alamosa,Colorado,US,2021-01-02 05:22:33,37.57250606,-105.7885451,948,24,0,924,"Alamosa, Colorado, US",5839.955645906487,2.5316455696202533