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outrigger --index error: "AttributeError: 'Series' object has no attribute 'iteritems'"

Status: Open.

#104 In YeoLab/outrigger;

· jordimaggi opened on May 8, 2023

sqlite3.OperationalError: disk I/O error

Status: Open.

#103 In YeoLab/outrigger;

· LiangShaw opened on Oct 22, 2021

ValueError: Cannot mask with non-boolean array containing NA / NaN values error

Status: Open.

#102 In YeoLab/outrigger;

· titand98 opened on Mar 15, 2021

how to set multiple threads

Status: Open.

#101 In YeoLab/outrigger;

· fuhao1216 opened on Dec 23, 2020

Database locked when detecting de novo exons after no novel exons found on a chromosome

Status: Open.

#100 In YeoLab/outrigger;

· QuentinLetourneur opened on Aug 17, 2020

KeyError: junction

Status: Open.

#98 In YeoLab/outrigger;

· wbvguo opened on May 2, 2020

Calculating PSI of single-cell data with outrigger

Status: Open.

#96 In YeoLab/outrigger;

· hmutpw opened on Mar 19, 2020

Unstacked DataFrame is too big, causing int32 overflow

Status: Open.

#95 In YeoLab/outrigger;

· Qi-Yang-Bioinfo opened on Mar 10, 2020

How to use outrigger index with "-c"?

Status: Open.

#94 In YeoLab/outrigger;

· QijinYin opened on Nov 26, 2019

NotImplementedError: "flankBed"

Status: Open.

#93 In YeoLab/outrigger;

· YutingMa68 opened on Nov 13, 2019

Table 'GRCh37.chromInfo' doesn't exist // ERROR: chrom "14" not found in genome file. Exiting.

Status: Open.

#89 In YeoLab/outrigger;

· Ekomshiro opened on May 15, 2018

ERROR IN -- Creating a "gffutils" database ---"database is locked"

Status: Open.

#88 In YeoLab/outrigger;

· memooooooo opened on Nov 23, 2017