BHBC-2184: Fix DwCArchive generation

[anissa-agahchen]

Overview

Links to Jira tickets

(https://quartech.atlassian.net/browse/BHBC-2138)
(https://quartech.atlassian.net/browse/BHBC-2160)

Description of relevant changes

Previous process:

• transform xlsx file, store in s3, read from s3, generate workbook and store JSON in DB, decorate, scrape and upload spatial points (problem: the s3 file was missing the decorated content).
  New process:
• transform xlsx file, decorate, store JSON in DB, scrape and upload spatial points, generate workbook and store in S3

[github-actions]

Openshift URLs for the PR Deployment:

• App Route: https://biohubbc-app-934-af2668-dev.apps.silver.devops.gov.bc.ca/
• Api Route: https://biohubbc-api-934-af2668-dev.apps.silver.devops.gov.bc.ca/
• Pods: https://console.apps.silver.devops.gov.bc.ca/k8s/ns/af2668-dev/pods?name=934

[codecov]

Codecov Report

Merging #934 (7e83625) into dev (f6401aa) will decrease coverage by 0.06%.
The diff coverage is 83.78%.

@@            Coverage Diff             @@
##              dev     #934      +/-   ##
==========================================
- Coverage   65.73%   65.68%   -0.06%     
==========================================
  Files         350      350              
  Lines       11327    11318       -9     
  Branches     1961     1959       -2     
==========================================
- Hits         7446     7434      -12     
- Misses       3477     3481       +4     
+ Partials      404      403       -1     

Impacted Files	Coverage Δ
...d}/survey/{surveyId}/observation/submission/get.ts	83.33% <ø> (ø)
api/src/services/occurrence-service.ts	95.23% <ø> (ø)
api/src/services/validation-service.ts	81.57% <82.35%> (-0.41%)	⬇️
api/src/paths/xlsx/process.ts	96.87% <100.00%> (+2.28%)	⬆️
api/src/services/dwc-service.ts	82.05% <100.00%> (-7.75%)	⬇️

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[sonarqubecloud]

Kudos, SonarCloud Quality Gate passed!   

0 Bugs
0 Vulnerabilities
0 Security Hotspots
0 Code Smells

No Coverage information
0.0% Duplication