BHBC-2221-3: Additional Cleanup

[NickPhura]

Overview

Links to Jira tickets

https://quartech.atlassian.net/browse/BHBC-2221

Description of relevant changes

• A few minor additions/cleanup to pipeline
• Remove most references to n8n

PR Checklist

A list of items that are good to consider when making any changes.

Note: this list is not exhaustive, and not all items are always applicable.

Code

• New files/classes/functions have appropriately descriptive names and comment blocks to describe their use/behaviour
• I have avoided duplicating code when possible, moving re-usable pieces into functions
• I have avoided hard-coding values where possible and moved any re-usable constants to a constants file
• My code is as flat as possible (avoids deeply nested if/else blocks, promise chains, etc)
• My code changes account for null/undefined values and handle errors appropriately
• My code uses types/interfaces to help describe values/parameters/etc, help ensure type safety, and improve readability

Style

• My code follows the established style conventions
• My code uses native material-ui components/icons/conventions when possible

Documentation

• I have commented my code sufficiently, such that an unfamiliar developer could understand my code
• I have added/updated README's and related documentation, as needed

Tests

• I have added/updated unit tests for any code I've added/updated
• I have added/updated the Postman requests/tests to account for any API endpoints I've added/updated

Linting/Formatting

• I have run the linter and fixed any issues, as needed
  See the lint commands in package.json
• I have run the formatter and fixed any issues, as needed
  See the format commands in package.json

SonarCloud

• I have addressed all SonarCloud Bugs, Vulnerabilities, Security Hotspots, and Code Smells

[github-actions]

Openshift URLs for the PR Deployment:

• App Route: https://biohubbc-app-958-af2668-dev.apps.silver.devops.gov.bc.ca/
• Api Route: https://biohubbc-api-958-af2668-dev.apps.silver.devops.gov.bc.ca/
• Pods: https://console.apps.silver.devops.gov.bc.ca/k8s/ns/af2668-dev/pods?name=958

[codecov]

Codecov Report

Merging #958 (1aaecff) into dev (7f67981) will increase coverage by 0.01%.
The diff coverage is n/a.

@@            Coverage Diff             @@
##              dev     #958      +/-   ##
==========================================
+ Coverage   66.02%   66.04%   +0.01%     
==========================================
  Files         352      352              
  Lines       11443    11440       -3     
  Branches     1981     1980       -1     
==========================================
  Hits         7555     7555              
+ Misses       3485     3482       -3     
  Partials      403      403              

Impacted Files	Coverage Δ
api/src/repositories/attachment-repository.ts	93.81% <ø> (ø)
api/src/utils/file-utils.ts	63.01% <ø> (ø)
app/src/contexts/configContext.tsx	13.88% <ø> (+1.06%)	⬆️

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[KjartanE]

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[sonarqubecloud]

Kudos, SonarCloud Quality Gate passed!   

0 Bugs
0 Vulnerabilities
0 Security Hotspots
0 Code Smells

No Coverage information
0.0% Duplication

[KjartanE]

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