[26.0] Add _F/_R auto-pairing filter for forward/reverse datasets#22267
Merged
mvdbeek merged 1 commit intogalaxyproject:release_26.0from Mar 27, 2026
Merged
[26.0] Add _F/_R auto-pairing filter for forward/reverse datasets#22267mvdbeek merged 1 commit intogalaxyproject:release_26.0from
mvdbeek merged 1 commit intogalaxyproject:release_26.0from
Conversation
Datasets using the _F/_R naming convention (e.g. ERR042228_F.fq.gz / ERR042228_R.fq.gz) were not being auto-paired. Add "Fs" filter to COMMON_FILTERS in both frontend and backend, with detection ordered after _R1/_R2 to avoid substring false matches. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
mvdbeek
approved these changes
Mar 26, 2026
|
This PR was merged without a "kind/" label, please correct. |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Datasets using the _F/_R naming convention (e.g. ERR042228_F.fq.gz / ERR042228_R.fq.gz) were not being auto-paired. Add "Fs" filter to COMMON_FILTERS in both frontend and backend, with detection ordered after _R1/_R2 to avoid substring false matches.
How to test the changes?
(Select all options that apply)
License