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[26.0] Add _F/_R auto-pairing filter for forward/reverse datasets#22267

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mvdbeek merged 1 commit intogalaxyproject:release_26.0from
jmchilton:pairing_fix_26_0
Mar 27, 2026
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[26.0] Add _F/_R auto-pairing filter for forward/reverse datasets#22267
mvdbeek merged 1 commit intogalaxyproject:release_26.0from
jmchilton:pairing_fix_26_0

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Datasets using the _F/_R naming convention (e.g. ERR042228_F.fq.gz / ERR042228_R.fq.gz) were not being auto-paired. Add "Fs" filter to COMMON_FILTERS in both frontend and backend, with detection ordered after _R1/_R2 to avoid substring false matches.

How to test the changes?

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  • I've included appropriate automated tests.
  • This is a refactoring of components with existing test coverage.
  • Instructions for manual testing are as follows:
    1. [add testing steps and prerequisites here if you didn't write automated tests covering all your changes]

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  • I agree to license these and all my past contributions to the core galaxy codebase under the MIT license.

Datasets using the _F/_R naming convention (e.g. ERR042228_F.fq.gz /
ERR042228_R.fq.gz) were not being auto-paired. Add "Fs" filter to
COMMON_FILTERS in both frontend and backend, with detection ordered
after _R1/_R2 to avoid substring false matches.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
@github-actions github-actions Bot added area/UI-UX area/database Galaxy's database or data access layer labels Mar 26, 2026
@github-actions github-actions Bot added this to the 26.1 milestone Mar 26, 2026
@mvdbeek mvdbeek merged commit 9173f42 into galaxyproject:release_26.0 Mar 27, 2026
57 of 59 checks passed
@github-project-automation github-project-automation Bot moved this from Needs Review to Done in Galaxy Dev - weeklies Mar 27, 2026
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This PR was merged without a "kind/" label, please correct.

@nsoranzo nsoranzo deleted the pairing_fix_26_0 branch March 27, 2026 16:03
@ahmedhamidawan ahmedhamidawan modified the milestones: 26.1, 26.0 Mar 31, 2026
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