Adds
- [open-chromatin] Adds open chromatin prediction subcommand for 6mA MTase-treated DNA
- [all] Fallback to ML 254 when threshold is estimated as 1.0
Changes
- [all] Refactor to workspaces
- [modbam, check-tags] Adds
--head <n>
option to take firstn
reads
Fixes
- [stats] Allow BED5 input regions and header/comment lines