Software for predicting translation initiation rates in bacteria
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Nov 21, 2024 - Python
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bioengineering
Here are 18 public repositories matching this topic...
A general Python framework for using hidden Markov models on binary trees or cell lineage trees.
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Apr 12, 2024 - Python
nanoDNA-nanoROBOT-simulation: Open-source Python project for modeling and simulating DNA-based nanorobot behavior. 🧬🤖
python open-source science machine-learning bioinformatics algorithms simulation computational-biology artificial-intelligence dna neural-networks data-analysis computational-modeling molecular-biology biomedical-engineering bioengineering nanotechnology
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Mar 17, 2024 - Python
A command-line interface and biochemical pathway finder based on KEGG
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May 19, 2019 - Python
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Aug 22, 2023 - Python
Repository corresponding to the TFG 'Detection of the degree of diabetic retinopathy by means of convolutional networks' of the bachelor's degree in Bioengineering of the University of Burgos.
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Jun 12, 2023 - Python
A Scalable Pipeline for Discovery of aaRS Mutants to Aid in Genetic Code Expansion.
python bioinformatics pipeline nextflow biology synthetic-biology computational-biology bioengineering
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Sep 1, 2022 - Python
A transformer-based masked language model for learning amino acid sequence representations. The model uses self-attention mechanisms with custom gating and incorporates protein features for enhanced sequence understanding. Trained using BERT-style masking on peptide sequences to learn contextual amino acid embeddings.
deep-learning protein-sequences custom-transformer bioengineering distillation-model transformers-models distillation-loss
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Mar 7, 2025 - Python
PathwayNet is a project based on Python and Bioinformatics. It tries to build up mathematic modes on simulating pathways of amino acid synthesis in E. coli.
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Oct 31, 2018 - Python
Interactive Streamlit app for detecting Parkinson’s Disease from voice recordings using a transparent stacked‑ensemble model, featuring per‑patient analysis, radar/bar charts, and feature‑importance insights.
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May 17, 2025 - Python
Real-Time Evolutionary AI Ecosystem for Intelligent Genomics and Bioengineering
machine-learning ecosystem bioinformatics ai genomics genome models blockchain neural-networks wave crispr data-ingestion bioengineering biotech gene-editing
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Jan 23, 2025 - Python
Introductory Python Workshops! Check out README for more info!
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Dec 18, 2021 - Python
Repository for studying extraterrestrial plant life and ecosystems, exploring the potential for agriculture, bioengineering, and terraforming on celestial bodies across the cosmos.
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Sep 4, 2024 - Python
This is a computational framework to analyze raw biological data generated from a polygraph test for the purpose of making psychophysiological inferences.
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Jan 28, 2019 - Python
This project aims to model the disruptive effects of cytotoxic chemotherapeutic drugs on the immunoediting process.
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Feb 20, 2020 - Python
University of Antioquia. Sensors. ECG meassurement with the micro chip AD8232
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Dec 27, 2021 - Python
Analysis code for the RePlay usability study
python neuroscience data-analysis ut-dallas neuroengineering bioengineering txbdc vagus-nerve-stimulation
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Jul 16, 2021 - Python
This repository contains a sclerosing foam simulator that calculates the liquid height inside the injection syringe.
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Apr 1, 2022 - Python
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